Search results for "Bayesian mixing model"
showing 3 items of 3 documents
Inferring phytoplankton community composition with a fatty acid mixing model
2015
Abstract. The taxon specificity of fatty acid composition in algal classes suggests that fatty acids could be used as chemotaxonomic markers for phytoplankton composition. The applicability of phospholipid-derived fatty acids as chemotaxonomic markers for phytoplankton composition was evaluated by using a Bayesian fatty acid-based mixing model. Fatty acid profiles from monocultures of chlorophytes, cyanobacteria, diatoms, euglenoids, dinoflagellates, raphidophyte, cryptophytes and chrysophytes were used as a reference library to infer phytoplankton community composition in five moderately humic, large boreal lakes in three different seasons (spring, summer and fall). The phytoplankton commu…
A Bayesian stable isotope mixing model for coping with multiple isotopes, multiple trophic steps and small sample sizes
2022
We introduce a Bayesian stable isotope mixing model for estimating the relative contributions of different dietary components to the tissues of consumers within food webs. The model is implemented with the probabilistic programming language Stan. The model incorporates isotopes of multiple elements (e.g. C, N, H) for two trophic levels, when the structure of the food web is known. In addition, the model allows inclusion of latent trophic levels (i.e. for which no empirical data are available) intermediate between sources and measured consumers. Running the model in simulations driven by a real dataset from Finnish lakes, we tested the sensitivity of the posterior distributions by altering c…
Trophic structure of vermetid reef community: High trophic diversity at small spatial scales
2013
Stable isotopes were used to investigate contributions of autochthonous (i.e. benthic: epilithon and macroalgae) and allochthonous (i.e. pelagic: phytoplankton) organic matter sources to the diet of suspension-feeders, grazers and predators associated to small reef-pools (cuvettes) created by the reef-building species Dendropoma petraeum in the north-western coast of Sicily (Italy). Contributions of potential food sources were calculated using Bayesian mixing-models and integrated to a multivariate approach to highlight the diversity of C and N pathways within Dendropoma cuvettes. Both pelagic and benthic organic matter sources were exploited by benthic consumers, although clear differences…